CDPK
T-DNA Insertion Lines (SALK Institute and Syngenta)
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lists with SIGnAL "T-DNA Express" gene map snap shots and
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Name |
Insertional mutagen |
Clone Nameb |
Hitc |
Sourced |
Notee |
CPK1 |
T-DNA |
SALK_010530 |
Exon |
A |
|
|
T-DNA |
SALK_007911 |
Intron |
A |
|
|
T-DNA |
SALK_007917 |
Intron |
A |
|
|
T-DNA |
SALK_007918 |
Intron |
A |
|
|
T-DNA |
SALK_007919 |
Intron |
A |
|
|
T-DNA |
SALK_007698 |
Exon |
A |
|
|
T-DNA |
Garlic_345_B04 |
Intron |
B |
|
CPK2 |
T-DNA |
SALK_014870 |
300-3' |
A |
|
|
T-DNA |
SALK_036166 |
Exon |
A |
|
|
T-DNA |
Garlic_1288_C10 |
Exon |
B |
|
CPK3 |
T-DNA |
Garlic_234_B06 |
300-5' |
B |
|
CPK4 |
T-DNA |
SALK_000685 |
Intron |
A |
|
|
T-DNA |
-- |
? |
D |
1 |
CPK6 |
T-DNA |
SALK_034106 |
300-5' |
A |
|
|
T-DNA |
SALK_033392 |
300-5' |
A |
|
|
T-DNA |
SALK_033739 |
300-5' |
A |
|
|
T-DNA |
Garlic_690_H07 |
Exon |
B |
|
|
T-DNA |
-- |
? |
D |
1 |
CPK7 |
T-DNA |
SALK_052656 |
L300-3' |
W |
|
|
T-DNA |
SALK_052662 |
L300-3' |
W |
|
|
T-DNA |
SALK_035601 |
Exon |
W |
|
|
T-DNA |
SALK_127223 |
Exon |
C |
|
|
T-DNA |
SAIL_588_G05 |
L500-5' |
B |
|
|
T-DNA |
SAIL_672_C06 |
L500-5' |
B |
|
|
T-DNA |
SAIL_1163_B01 |
L500-5' |
B |
|
|
T-DNA |
SAIL_143b_A03 |
L500-5' |
B |
|
|
T-DNA |
SAIL_16_A10 |
L500-5' |
B |
|
|
T-DNA |
SAIL_234_B11 |
L500-5' |
B |
|
|
T-DNA |
SAIL_797_D05 |
L500-5' |
B |
|
CPK8 |
T-DNA |
SALK_036581 |
Exon |
A |
|
CPK7 |
T-DNA |
SALK_052656 |
L300-3' |
A |
|
|
T-DNA |
-- |
? |
D |
1 |
|
T-DNA |
-- |
? |
D |
1 |
|
T-DNA |
-- |
? |
D |
1 |
|
T-DNA |
-- |
? |
D |
1 |
|
T-DNA |
-- |
? |
D |
1 |
|
T-DNA |
-- |
? |
D |
1 |
|
T-DNA |
-- |
? |
D |
1 |
|
T-DNA |
-- |
? |
D |
1 |
CPK9 |
T-DNA |
SALK_034324 |
300-5' |
A |
|
|
T-DNA |
|
? |
D |
1, 2 |
CPK10 |
T-DNA |
SALK_015994 |
300-3' |
A |
|
|
T-DNA |
SALK_032021 |
Intron |
A |
|
|
T-DNA |
SALK_003484 |
Exon |
A |
|
|
T-DNA |
|
? |
D |
1, 2 |
CPK11 |
T-DNA |
SALK_007814 |
Intron |
A |
|
|
T-DNA |
|
? |
D |
1, 2 |
CPK12 |
T-DNA |
Garlic_839_H10 |
Intron |
B |
|
CPK15 |
T-DNA |
Garlic_1284_H09 |
Promoter |
B |
|
CPK17 |
T-DNA |
SALK_001818 |
300-3' |
A |
|
CPK19 |
T-DNA |
SALK_001691 |
Exon |
A |
|
|
T-DNA |
SALK_001685 |
Exon |
A |
|
|
T-DNA |
Garlic_1215_F07 |
Exon |
B |
|
CPK20 |
T-DNA |
Garlic_377_G02 |
Promoter |
B |
|
CPK21 |
T-DNA |
SALK_029412 |
Exon |
A |
|
CPK23 |
T-DNA |
SALK_007958 |
Intron |
A |
|
|
T-DNA |
Garlic_754_E09 |
Exon |
B |
|
CPK24 |
T-DNA |
SALK_015986 |
Exon |
A |
|
CPK27 |
T-DNA |
Garlic_61_A09 |
300-5' |
B |
|
CPK29 |
T-DNA |
SALK_013734 |
300-3' |
A |
|
CPK30 |
T-DNA |
Garlic_337_G01 |
Promoter |
B |
|
CPK31 |
T-DNA |
SALK_007777 |
Exon |
C |
|
|
T-DNA |
SALK_007836 |
Intron |
C |
|
|
T-DNA |
SALK_007777 |
Exon |
C |
|
|
T-DNA |
SALK_007844 |
Intron |
W |
|
|
T-DNA |
SALK_007836 |
Intron |
W |
|
|
T-DNA |
SALK_049221 |
Intron |
C |
|
T-DNA |
SALK_049228 |
Exon |
C |
|
T-DNA |
SALK_049236 |
Exon |
C |
CPK32 |
Transposon |
et5772|ds5 |
Exon |
C |
|
CPK33 |
T-DNA |
Garlic_26_C12 |
Exon |
B |
|
a The insertional mutants listed are all Columbia
ecotype. b The criteria used to determine insertional mutants
form TMRI/Syngenta and Genetrap after BLAST search are E value
less than 1e-04 and score greater than 460. c 300-3'(5') indicates
that insertion is within 300 nucleotides in the 3' (5') of
the open reading frame, while insertion between 300 and 1000
nucleotides in the 5' of the open reading frame is listed
as an insertion in the promoter. d The sources of knockout
collections are: A, Salk Institute Genomic Analysis laboratory
(http://signal.salk.edu ); B, TMRI/Syngenta (http://www.tmri.org);
C, Genetrap (Cold Spring Harbor Laoratroy; http://sciclio.cshl.org);
D, Wisconsin Arabidopsis Knockout Facility (http://www.biotech.wisc.edu).
e 1, Satterlee and Sussman, 1998; 2, Krysan et al., 1996. |