Characteristics of Arabidopsis CDPKs | ||||||||||||||||||||||||||||||||||
Namea (previous name) | AGI IDb | Genomic | Expressed | Mol wt (kDa) | V.D.e | EFf | N-term. | N- | Subcel.i | Notej | ||||||||||||||||||||||||
LocusC | Gene?d | a. a.g | Myrist.h | Dist. | ||||||||||||||||||||||||||||||
CPK1(AK1) | At5g04870 | MUK11.19 | 3 EST | 68.2 | 149 | 4 | MGNTCVGP | Yes | peroxisome | 1 | ||||||||||||||||||||||||
CPK2 | At3g10660 | F13M14.5 | 4 EST | 72.2 | 185 | 4 | MGNACVGP | Yes | ER | 2 | ||||||||||||||||||||||||
CPK3(6) | At4g23650 | F9D16.120 | 9 EST | 59.3 | 77 | 4 | NGHRHSKS | No | ? | 2,3 | ||||||||||||||||||||||||
CPK4 | At4g09570 | T25P22.10 | 2 EST | 56.4 | 24 | 4 | MEKPNPRR | No | ? | 2 | ||||||||||||||||||||||||
CPK5 | At4g35310 | F23E12130 | 7 EST | 62.1 | 96 | 4 | MGNSCRGS | Yes | membrane | 2 | ||||||||||||||||||||||||
CPK6(3) | At2g17290 | F5J6.13 | 4 EST | 61.6 | 84 | 4 | MGNSCRGS | Yes | membrane | 2 | ||||||||||||||||||||||||
CPK7 | At5g12480 | Yes | 60.3 | 58 | 3 | MGNCCGNP | Yes | ? | 2 | |||||||||||||||||||||||||
CPK8(19) | At5g19450 | F7K24.200 | 6 EST | 59.9 | 56 | 3 | MGNCCASP | Yes | ? | 2,3 | ||||||||||||||||||||||||
CPK9 | At3g20410 | MQC12.17 | 8 EST | 60.4 | 90 | 4 | MGNCFAKN | Yes | ? | 2 | ||||||||||||||||||||||||
CPK10(1) | At1g18890 | F6A14.1 | 2 EST | 61.4 | 62 | 3 | MGNCNACV | Yes | ? | 4 | ||||||||||||||||||||||||
CPK11(2) | At1g35670 | F15O4.8 | Yes | 55.9 | 26 | 4 | METKPNPR | No | ? | 4 | ||||||||||||||||||||||||
CPK12(9) | At5g23580 | MQM1.15 | Yes | 55.4 | 21 | 4 | MANKPRTR | No | ? | 5 | ||||||||||||||||||||||||
CPK13 | At3g51850 | ORF10 | Yes | 59.4 | 53 | 2 | MGNCCRSP | No | ? | 5 | ||||||||||||||||||||||||
CPK14 | At2g41860 | T6D20.24 | ? | 60.1 | 53 | 3 | MGNCCGTA | Yes | ? | |||||||||||||||||||||||||
CPK15 | At4g21940 | T8O5.150 | Yes | 62.6 | 101 | 4 | MGCFSSKH | Yes | ? | 6 | ||||||||||||||||||||||||
CPK16 | At2g17890 | T13L16.9 | 1 EST | 64.8 | 107 | 4 | MGLCFSSA | Yes | ? | 6 | ||||||||||||||||||||||||
CPK17 | At5g12180 | MXC9.14 | RAFL06-70-F18 | 58.5 | 72 | 4 | MGNCCSHG | Yes | ? | |||||||||||||||||||||||||
CPK18 | At4g36070 | T19K4.200 | Yes | 60.2 | 70 | 4 | MGLCFSSP | Yes | ? | |||||||||||||||||||||||||
CPK19 | At1g61950 | F8K4.26 | Yes | 62.9 | 97 | 3 | MGCLCINL | No | ? | 5 | ||||||||||||||||||||||||
CPK20 | At2g38910 | T7F6.8 | X86963 | 64.7 | 133 | 4 | MGNTCVGP | Yes | ? | |||||||||||||||||||||||||
CPK21 | At4g04720 | T4B21.13 | 5 EST | 59.9 | 79 | 4 | MGCFSSKH | Yes | ? | 6 | ||||||||||||||||||||||||
CPK22 | At4g04710 | T4B21.12 | 3 EST | 55.9 | 35 | 5 | MGNCCGSK | Yes | ? | |||||||||||||||||||||||||
CPK23 | At4g04740 | T4B21.15 | 2 EST | 58.7 | 68 | 3 | MGCFSSKH | Yes | ? | |||||||||||||||||||||||||
CPK24 | At2g31500 | T9H9.2 | ? | 66.2 | 65 | 4 | MGSCVSSP | Yes | ? | |||||||||||||||||||||||||
CPK25 | At2g35890 | F11F19.20 | Yes | 58.9 | 131 | 1 | MGNVCVHM | Yes | ? | 5 | ||||||||||||||||||||||||
CPK26 | At4g38230 | F20D10.350 | ? | 54.3 | 23 | 4 | MKHSGGNQ | No | ? | |||||||||||||||||||||||||
CPK27 | At4g04700 | T4B21.11 | Yes | 54.9 | 27 | 0 | MGCFSSKE | Yes | ? | |||||||||||||||||||||||||
CPK28 | At5g66210 | K2A18.29 | 5 EST | 59 | 61 | 4 | MGVCFSAI | Yes | ? | |||||||||||||||||||||||||
CPK29 | At1g76040 | T4O12.25 | 1 EST | 60.5 | 84 | 3 | MGCYSSKN | No | ? | |||||||||||||||||||||||||
CPK30(1a) | At1g74740 | F25A4.29 | 2 EST | 64.2 | 58 | 4 | MGNCIACV | Yes | ? | |||||||||||||||||||||||||
CPK31 | At4g04695 | T19J18.7 | ? | 51.4 | 47 | 4 | MMILHKPP | No | ? | |||||||||||||||||||||||||
CPK32 | At3g57530 | T8H10.130 | 7 EST | 63.4 | 51 | 3 | MGNCCGTA | Yes | ? | |||||||||||||||||||||||||
CPK33 | At1g50700 | F17J6.22 | Yes | 58.6 | 57 | 4 | MGNCLAKK | Yes | ? | |||||||||||||||||||||||||
CPK34 | At5g19360 | F7K24.110 | Yes | 58.2 | 49 | 4 | MGNCCSHG | Yes | ? | 5 | ||||||||||||||||||||||||
a Numbers in parentheses indicate names given to previously published Arabidopsis CDPKs. 6, CDPK6; 3, CDPK3, 19, CDPK19; 1, CDPK1; 2, CDPK2; 9, CDPK9; 1a, CDPK1a. b Systematic designation given to gene by Arabidopsis Genome Inititive. Genes marked by a asterisk were not assigned numbers during annotation. c Designation of gene locus on annotated bacterial artificial chromosome. D Indicates whether gene is expressed, based on cloned cDNA (see Note for reference) or presence of cognated EST or full length cDNA. e Numbers of amino acids in variable domain. f Number of EF hands predicted by SMART (Shultz et al., 1998) and by sequence aligment (Fig. 2). g The first 8 amino acids at N-terminus of the CDPKs. hThe prediction of Myristoylation motif is based on PROSITE program (Hoffmann et al., 1999) with considerations drew from Towler et al. (1988), Ellard-Ivey et al. (1999), Martin and Busconi (2000), Lu et al.,(2001), and Raices et al. (2001). i Subcellular distribution. j 1, Harper et al., 1993; 2, Hrabak et al., 1996; 3, Hong et al., 1996; 4, Urao et al., 1994; 5, Willmann et al., unpublished; 6, Harmon et al., 2001. |