Please note that: - the SALK snapshots were taken on November 03 2004. New lines appear every day. Choose the best mutants. Remember that the site of the actual T-DNA insertion can be between 0 and 300 bp before the beginning of the arrow, so the "exon, intron, 5', 3'" indication is not very precise, and the orientation of the insertion is important if you want to increase the chance of picking up a real knock-out. - the GARLIC lines were blasted on September 2001, but the sequencing of flanking sequences was already finished. And the syngenta website for T-DNA search is no longer exist. You can compare these results with Cheri's tables on our web site.
Guillaume |
MPK1 At1g10210 |
SALK: click here for updated view |
GARLIC: see raw Blast results |
Garlic_580_H03.b.1a.Lb3Fa CHROMAT_FILE: Garlic_580_H03.b.1a.Lb... 123 5e-25 Garlic_839_E02.b.1a.Lb3Fa CHROMAT_FILE: Garlic_839_E02.b.1a.Lb... 46 0.087 Garlic_619_H11.b.1b.Lb3Fa CHROMAT_FILE: Garlic_619_H11.b.1b.Lb... 46 0.087 Garlic_590_G06.b.1a.Lb3Fa CHROMAT_FILE: Garlic_590_G06.b.1a.Lb... 46 0.087 |
MPK2 At1g59580 |
SALK: click here for updated view |
GARLIC: see raw Blast results |
Garlic_590_G06.b.1a.Lb3Fa CHROMAT_FILE: Garlic_590_G06.b.1a.Lb... 876 0.0 Garlic_580_H03.b.1a.Lb3Fa CHROMAT_FILE: Garlic_580_H03.b.1a.Lb... 829 0.0 Garlic_317_H08.b.1a.Lb3Fa CHROMAT_FILE: Garlic_317_H08.b.1a.Lb... 577 e-161 Garlic_874_G12.b.1a.Lb3Fa CHROMAT_FILE: Garlic_874_G12.b.1a.Lb... 464 e-127 Garlic_619_H11.b.1b.Lb3Fa CHROMAT_FILE: Garlic_619_H11.b.1b.Lb... 301 9e-79 Garlic_839_E02.b.1a.Lb3Fa CHROMAT_FILE: Garlic_839_E02.b.1a.Lb... 60 6e-06 |
MPK3 At3g45640 |
SALK: click here for updated view |
GARLIC: see raw Blast results |
Garlic_873_G05.b.1a.Lb3Fa CHROMAT_FILE: Garlic_873_G05.b.1a.Lb... 333 3e-88 Garlic_563_B12.b.1a.Lb3Fa CHROMAT_FILE: Garlic_563_B12.b.1a.Lb... 331 1e-87 Garlic_2_F03.b.1a.Lb3Fb CHROMAT_FILE: Garlic_2_F03.b.1a.Lb3Fb ... 325 7e-86 Garlic_2_F03.b.1a.Lb3Fa CHROMAT_FILE: Garlic_2_F03.b.1a.Lb3Fa ... 325 7e-86 Garlic_2_G04.b.1a.Lb3Fb CHROMAT_FILE: Garlic_2_G04.b.1a.Lb3Fb ... 180 3e-42 Garlic_2_G04.b.1a.Lb3Fa CHROMAT_FILE: Garlic_2_G04.b.1a.Lb3Fa ... 163 6e-37 Garlic_715_H05.b.1a.Lb3Fa CHROMAT_FILE: Garlic_715_H05.b.1a.Lb... 147 4e-32 Garlic_2_F02.b.1a.Lb3Fa CHROMAT_FILE: Garlic_2_F02.b.1a.Lb3Fa ... 119 8e-24 Garlic_2_F02.b.1a.Lb3Fb CHROMAT_FILE: Garlic_2_F02.b.1a.Lb3Fb ... 90 8e-15 Garlic_2_F04.b.1a.Lb3Fb CHROMAT_FILE: Garlic_2_F04.b.1a.Lb3Fb ... 80 7e-12 Garlic_839_E02.b.1a.Lb3Fa CHROMAT_FILE: Garlic_839_E02.b.1a.Lb... 58 3e-05 Garlic_2_G03.b.1a.Lb3Fa CHROMAT_FILE: Garlic_2_G03.b.1a.Lb3Fa ... 54 4e-04 Garlic_669_B05.b.1a.Lb3Fa CHROMAT_FILE: Garlic_669_B05.b.1a.Lb... 50 0.007 |
MPK4 At4g01370 |
SALK: click here for updated view |
GARLIC: see raw Blast results |
Garlic_219_E04.b.1a.Lb3Fa CHROMAT_FILE: Garlic_219_E04.b.1a.Lb... 96 1e-16 Garlic_750_A10.b.1a.Lb3Fa CHROMAT_FILE: Garlic_750_A10.b.1a.Lb... 76 1e-10 Garlic_543_F07.b.1a.Lb3Fa CHROMAT_FILE: Garlic_543_F07.b.1a.Lb... 58 3e-05 Garlic_839_E02.b.1a.Lb3Fa CHROMAT_FILE: Garlic_839_E02.b.1a.Lb... 52 0.002 |
MPK5 At4g11330 |
SALK: click here for updated view |
GARLIC: see raw Blast results |
Garlic_771_C09.b.1c.Lb3Fa CHROMAT_FILE: Garlic_771_C09.b.1c.Lb... 264 2e-67 |
MPK6 At2g43790 |
SALK: click here for updated view |
GARLIC: see raw Blast results |
Garlic_335_F03.b.1a.Lb3Fa CHROMAT_FILE: Garlic_335_F03.b.1a.Lb... 226 6e-56 Garlic_343_C08.b.1a.Lb3Fa CHROMAT_FILE: Garlic_343_C08.b.1a.Lb... 117 4e-23 Garlic_11_D11.b.1a.Lb3Fa CHROMAT_FILE: Garlic_11_D11.b.1a.Lb3F... 68 3e-08 Garlic_543_F07.b.1a.Lb3Fa CHROMAT_FILE: Garlic_543_F07.b.1a.Lb... 48 0.032 |
MPK7 At2g18170 |
SALK: click here for updated view |
GARLIC: see raw Blast results |
Garlic_839_E02.b.1a.Lb3Fa CHROMAT_FILE: Garlic_839_E02.b.1a.Lb... 278 1e-71 Garlic_231_F11.b.1a.Lb3Fa CHROMAT_FILE: Garlic_231_F11.b.1a.Lb... 119 7e-24 |
MPK8 At1g18150 |
SALK: click here for updated view |
GARLIC: see raw Blast results |
Garlic_1221_F01.b.1a.Lb3Fa CHROMAT_FILE: Garlic_1221_F01.b.1a.... 507 e-140 Garlic_421_F11.b.1a.Lb3Fa CHROMAT_FILE: Garlic_421_F11.b.1a.Lb... 64 7e-07 Garlic_267b_H02.b.1a.Lb3Fa CHROMAT_FILE: Garlic_267b_H02.b.1a.... 64 7e-07 Garlic_142_B05.b.1a.Lb3Fa CHROMAT_FILE: Garlic_142_B05.b.1a.Lb... 64 7e-07 Garlic_78_G11.b.1a.Lb3Fa CHROMAT_FILE: Garlic_78_G11.b.1a.Lb3F... 56 2e-04 Garlic_506_E01.b.1b.Lb3Fa CHROMAT_FILE: Garlic_506_E01.b.1b.Lb... 54 6e-04 |
MPK9 At3g18040 |
SALK: click here for updated view |
GARLIC: see raw Blast results |
Garlic_105_B09.b.1a.Lb3Fa CHROMAT_FILE: Garlic_105_B09.b.1a.Lb... 236 1e-58 Garlic_1221_F01.b.1a.Lb3Fa CHROMAT_FILE: Garlic_1221_F01.b.1a.... 48 0.047 |
MPK10 At3g59790 |
SALK: click here for updated view |
GARLIC: see raw Blast results |
Garlic_856_H08.b.1a.Lb3Fa CHROMAT_FILE: Garlic_856_H08.b.1a.Lb... 531 e-148 Garlic_825_C07.b.1a.Lb3Fa CHROMAT_FILE: Garlic_825_C07.b.1a.Lb... 216 5e-53 Garlic_1262_C12.b.1a.Lb3Fa CHROMAT_FILE: Garlic_1262_C12.b.1a.... 101 2e-18 Garlic_862_C01.b.1a.Lb3Fa CHROMAT_FILE: Garlic_862_C01.b.1a.Lb... 46 0.11 |
MPK11 At1g01560 |
SALK: click here for updated view |
GARLIC: see raw Blast results |
Garlic_32_A10.b.1a.Lb3Fa CHROMAT_FILE: Garlic_32_A10.b.1a.Lb3F... 280 4e-72 Garlic_837_F01.b.1a.Lb3Fa CHROMAT_FILE: Garlic_837_F01.b.1a.Lb... 272 1e-69 Garlic_543_F07.b.1a.Lb3Fa CHROMAT_FILE: Garlic_543_F07.b.1a.Lb... 80 8e-12 Garlic_1253_E07.b.1a.Lb3Fb CHROMAT_FILE: Garlic_1253_E07.b.1a.... 56 1e-04 Garlic_1253_E07.b.1a.Lb3Fa CHROMAT_FILE: Garlic_1253_E07.b.1a.... 44 0.45 |
MPK12 At2g46070 |
SALK: click here for updated view |
GARLIC: see raw Blast results |
Garlic_543_F07.b.1a.Lb3Fa CHROMAT_FILE: Garlic_543_F07.b.1a.Lb... 743 0.0 Garlic_1297_A06.b.1a.Lb3Fa CHROMAT_FILE: Garlic_1297_A06.b.1a.... 72 2e-09 |
MPK13 At1g07880 |
SALK: click here for updated view |
GARLIC: see raw Blast results |
Nothing |
MPK14 At4g36450 |
SALK: click here for updated view |
GARLIC: see raw Blast results |
Garlic_839_E02.b.1a.Lb3Fa CHROMAT_FILE: Garlic_839_E02.b.1a.Lb... 1124 0.0 Garlic_552_B02.b.1a.Lb3Fa CHROMAT_FILE: Garlic_552_B02.b.1a.Lb... 141 2e-30 |
MPK15 At1g73670 |
SALK: click here for updated view |
GARLIC: see raw Blast results |
Garlic_421_F11.b.1a.Lb3Fa CHROMAT_FILE: Garlic_421_F11.b.1a.Lb... 890 0.0 Garlic_142_B05.b.1a.Lb3Fa CHROMAT_FILE: Garlic_142_B05.b.1a.Lb... 815 0.0 Garlic_267b_H02.b.1a.Lb3Fa CHROMAT_FILE: Garlic_267b_H02.b.1a.... 656 0.0 Garlic_120_C09.b.1a.Lb3Fa CHROMAT_FILE: Garlic_120_C09.b.1a.Lb... 147 6e-32 Garlic_1221_F01.b.1a.Lb3Fa CHROMAT_FILE: Garlic_1221_F01.b.1a.... 117 5e-23 Garlic_303_A09.b.1a.Lb3Fa CHROMAT_FILE: Garlic_303_A09.b.1a.Lb... 46 0.16 Garlic_5_H04.b.1a.Lb3Fa CHROMAT_FILE: Garlic_5_H04.b.1a.Lb3Fa ... 44 0.62 |
MPK16 At5g19010 |
SALK: click here for updated view |
GARLIC: see raw Blast results |
Garlic_330_E01.b.1a.Lb3Fa CHROMAT_FILE: Garlic_330_E01.b.1a.Lb... 537 e-149 Garlic_1168_G11.b.1a.Lb3Fb CHROMAT_FILE: Garlic_1168_G11.b.1a.... 226 7e-56 Garlic_433_G07.b.1a.Lb3Fa CHROMAT_FILE: Garlic_433_G07.b.1a.Lb... 119 1e-23 |
MPK17 At2g01450 |
SALK: click here for updated view |
GARLIC: see raw Blast results |
Nothing |
MPK18 At1g53510 |
SALK: click here for updated view |
GARLIC: see raw Blast results |
Garlic_757_B09.b.1a.Lb3Fa CHROMAT_FILE: Garlic_757_B09.b.1a.Lb... 341 2e-90 Garlic_730_B09.b.1a.Lb3Fa CHROMAT_FILE: Garlic_730_B09.b.1a.Lb... 109 1e-20 Garlic_757_C09.b.1a.Lb3Fa CHROMAT_FILE: Garlic_757_C09.b.1a.Lb... 62 3e-06 Garlic_1261_C03.b.1a.Lb3Fa CHROMAT_FILE: Garlic_1261_C03.b.1a.... 62 3e-06 Garlic_614_E10.b.1a.Lb3Fa CHROMAT_FILE: Garlic_614_E10.b.1a.Lb... 44 0.62 |
MPK19 At3g14720 |
SALK: click here for updated view |
GARLIC: see raw Blast results |
Garlic_1261_C03.b.1a.Lb3Fa CHROMAT_FILE: Garlic_1261_C03.b.1a.... 309 6e-81 Garlic_544_G10.b.1a.Lb3Fa CHROMAT_FILE: Garlic_544_G10.b.1a.Lb... 167 6e-38 |
MPK20 At2g42880 |
SALK: click here for updated view |
GARLIC: see raw Blast results |
Garlic_1185_H10.b.1a.Lb3Fa CHROMAT_FILE: Garlic_1185_H10.b.1a.... 1035 0.0 Garlic_655_D04.b.1a.Lb3Fa CHROMAT_FILE: Garlic_655_D04.b.1a.Lb... 50 0.010 |